Bug#872622: marked as done (ITP: bandage -- Bioinformatics Application for Navigating De novo Assembly Graphs Easily)

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Bug#872622: marked as done (ITP: bandage -- Bioinformatics Application for Navigating De novo Assembly Graphs Easily)

Debian Bug Tracking System
Your message dated Fri, 09 Nov 2018 14:10:47 +0000
with message-id <[hidden email]>
and subject line Bug#872622: fixed in bandage 0.8.1-1
has caused the Debian Bug report #872622,
regarding ITP: bandage -- Bioinformatics Application for Navigating De novo Assembly Graphs Easily
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [hidden email]
immediately.)


--
872622: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=872622
Debian Bug Tracking System
Contact [hidden email] with problems

Package: wnpp
Severity: wishlist
Owner: Debian Med <[hidden email]>

* Package name    : bandage
  Version         : 0.8.1
  Upstream Author : Ryan R. Wick <[hidden email]>
* URL             : https://github.com/rrwick/Bandage/
* License         : GPL3
  Programming Lang: C++
  Description     : Bioinformatics Application for Navigating De novo Assembly Graphs Easily

Bandage is a GUI program that allows users to interact with the assembly graphs made by de novo
assemblers such as Velvet, SPAdes, MEGAHIT and others.

De novo assembly graphs contain not only assembled contigs but also the connections between
those contigs, which were previously not easily accessible. Bandage visualises assembly graphs,
with connections, using graph layout algorithms. Nodes in the drawn graph, which represent
contigs, can be automatically labelled with their ID, length or depth. Users can interact with
the graph by moving, labelling and colouring nodes. Sequence information can also be extracted
directly from the graph viewer. By displaying connections between contigs, Bandage opens up new
possibilities for analysing and improving de novo assemblies that are not possible by looking at
contigs alone.

More information and download links are on the Bandage website: rrwick.github.io/Bandage

The package is relevant to the field of genome assembly and will be maintained by the Debian Med
team.

Source: bandage
Source-Version: 0.8.1-1

We believe that the bug you reported is fixed in the latest version of
bandage, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [hidden email],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <[hidden email]> (supplier of updated bandage package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [hidden email])


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Hash: SHA256

Format: 1.8
Date: Mon, 27 Aug 2018 11:41:01 +0200
Source: bandage
Binary: bandage
Architecture: source amd64
Version: 0.8.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <[hidden email]>
Changed-By: Andreas Tille <[hidden email]>
Description:
 bandage    - Bioinformatics Application for Navigating De novo Assembly Graphs
Closes: 872622
Changes:
 bandage (0.8.1-1) unstable; urgency=medium
 .
   * Initial release (Closes: #872622)
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