Bug#926098: hdf5: JUnit-TestH5P fails on 32 bit architectures

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Bug#926098: hdf5: JUnit-TestH5P fails on 32 bit architectures

Gilles Filippini-2
Source: hdf5
Version: 1.10.5+repack-1~exp1
Severity: serious
Justification: FTBFS

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HDF5 1.10.5 has just entered Debian experimental and the build logs report failures on 32 bit architectures at test JUnit-TestH5P:

java  -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=../../hdf5/lib -cp .:../../hdf5/lib/jarhdf5-1.10.5.jar:../../hdf5/lib/junit.jar:../../hdf5/lib/hamcrest-core.jar:../../hdf5/lib/slf4j-api-1.7.25.jar:../../hdf5/lib/slf4j-simple-1.7.25.jar:jarhdf5test.jar: -ea org.junit.runner.JUnitCore test.TestH5P
Testing JUnit-TestH5P                                                 [main] INFO hdf.hdf5lib.H5 - HDF5 library: hdf5_java
[main] INFO hdf.hdf5lib.H5 -  successfully loaded from java.library.path
**FAILED**    JUnit-TestH5P
    Expected result differs from actual result
    *** JUnit-TestH5P.txt Fri Mar 29 23:46:32 2019
    --- JUnit-TestH5P.out Fri Mar 29 23:46:38 2019
    ***************
    *** 47,53 ****
      .testH5P_sizes
      .testH5Pset_link_creation_order_invalidvalue
      .testH5P_sym_k
    ! .testH5PH5Pset_shared_mesg_phase_change_MinbtreeGreaterThanMaxlist
      .testH5Pset_scaleoffset_Invalidscale_factor
      .testH5Pget_elink_prefix_null
      .testH5Pget_data_transform_IllegalSize
    --- 47,53 ----
      .testH5P_sizes
      .testH5Pset_link_creation_order_invalidvalue
      .testH5P_sym_k
    ! E.testH5PH5Pset_shared_mesg_phase_change_MinbtreeGreaterThanMaxlist
      .testH5Pset_scaleoffset_Invalidscale_factor
      .testH5Pget_elink_prefix_null
      .testH5Pget_data_transform_IllegalSize
    ***************
    *** 84,89 ****
      .testH5Pset_attr_creation_order_tracked
     
      Time:  XXXX
     
    ! OK (83 tests)
     
    --- 84,131 ----
      .testH5Pset_attr_creation_order_tracked
     
      Time:  XXXX
    + There was 1 failure:
    + 1) testH5P_sym_k(test.TestH5P)
    + java.lang.AssertionError: symbol table tree rank: 0
    + at org.junit.Assert.fail(Assert.java:88)
    + at org.junit.Assert.assertTrue(Assert.java:41)
    + at test.TestH5P.testH5P_sym_k(TestH5P.java:990)
    + at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    + at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    + at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    + at java.base/java.lang.reflect.Method.invoke(Method.java:566)
    + at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:47)
    + at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
    + at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:44)
    + at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
    + at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26)
    + at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27)
    + at org.junit.rules.TestWatcher$1.evaluate(TestWatcher.java:55)
    + at org.junit.rules.RunRules.evaluate(RunRules.java:20)
    + at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:271)
    + at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:70)
    + at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
    + at org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
    + at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:63)
    + at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
    + at org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
    + at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
    + at org.junit.runners.ParentRunner.run(ParentRunner.java:309)
    + at org.junit.runners.Suite.runChild(Suite.java:127)
    + at org.junit.runners.Suite.runChild(Suite.java:26)
    + at org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
    + at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:63)
    + at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
    + at org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
    + at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
    + at org.junit.runners.ParentRunner.run(ParentRunner.java:309)
    + at org.junit.runner.JUnitCore.run(JUnitCore.java:160)
    + at org.junit.runner.JUnitCore.run(JUnitCore.java:138)
    + at org.junit.runner.JUnitCore.run(JUnitCore.java:117)
    + at org.junit.runner.JUnitCore.runMain(JUnitCore.java:96)
    + at org.junit.runner.JUnitCore.runMainAndExit(JUnitCore.java:47)
    + at org.junit.runner.JUnitCore.main(JUnitCore.java:40)
     
    ! FAILURES!!!
    ! Tests run: 83,  Failures: 1

Full build logs:
https://buildd.debian.org/status/fetch.php?pkg=hdf5&arch=i386&ver=1.10.5%2Brepack-1%7Eexp1&stamp=1553903207
https://buildd.debian.org/status/fetch.php?pkg=hdf5&arch=armel&ver=1.10.5%2Brepack-1%7Eexp1&stamp=1553911980
https://buildd.debian.org/status/fetch.php?pkg=hdf5&arch=armhf&ver=1.10.5%2Brepack-1%7Eexp1&stamp=1553910208
https://buildd.debian.org/status/fetch.php?pkg=hdf5&arch=mips&ver=1.10.5%2Brepack-1%7Eexp1&stamp=1553912089
https://buildd.debian.org/status/fetch.php?pkg=hdf5&arch=mipsel&ver=1.10.5%2Brepack-1%7Eexp1&stamp=1553912946
https://buildd.debian.org/status/fetch.php?pkg=hdf5&arch=powerpc&ver=1.10.5%2Brepack-1%7Eexp1&stamp=1553904085
https://buildd.debian.org/status/fetch.php?pkg=hdf5&arch=x32&ver=1.10.5%2Brepack-1%7Eexp1&stamp=1553905238

Thanks,

_g.

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