Bug#956232: sumaclust: Last sequence of input is skipped on arm64

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Bug#956232: sumaclust: Last sequence of input is skipped on arm64

Pierre Gruet
Package: sumaclust
Version: 1.0.35-2
Severity: normal
Tags: patch upstream

Version 1.0.35-2 of sumaclust runs on arm64 but the last sequence of input files is always skipped.
This appears to be linked to the way sequences are read in libfasta/sequence.c. I have proposed a patch to upstream, which seems to solve the problem. I am waiting for its opinion on it.

Best,
Pierre

reading-only-ACGT-sequences-safely.patch (1K) Download Attachment
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Bug#956232: sumaclust: Last sequence of input is skipped on arm64

Andreas Tille-2
Hi Pierre,

On Wed, Apr 08, 2020 at 07:21:54PM +0200, Pierre Gruet wrote:
> Package: sumaclust
> Version: 1.0.35-2
> Severity: normal
> Tags: patch upstream

Thanks again for your contribution.  Would you mind commiting your patch
right to salsa to enable me sponsoring your second package version?

Kind regards

     Andreas.

--
http://fam-tille.de

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Bug#956232: sumaclust: Last sequence of input is skipped on arm64

Pierre Gruet
Hi Andreas,

Le 08/04/2020 à 21:35, Andreas Tille a écrit :
>
> Thanks again for your contribution.  Would you mind commiting your patch
> right to salsa to enable me sponsoring your second package version?
>

Done, I have committed version 1.0.35-3. Now autopkgtests pass on amd64 and
arm64!

> Kind regards
>
>      Andreas.
>

Thanks again for your help,
Pierre

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Bug#956232: sumaclust: Last sequence of input is skipped on arm64

Andreas Tille-5
Hi Pierre,

On Wed, Apr 08, 2020 at 10:09:29PM +0200, Pierre Gruet wrote:
> >
> > Thanks again for your contribution.  Would you mind commiting your patch
> > right to salsa to enable me sponsoring your second package version?
> >
>
> Done, I have committed version 1.0.35-3. Now autopkgtests pass on amd64 and
> arm64!

Cool. Just uploaded.
 
> Thanks again for your help,

You are welcome.  Its a pleasure to cooperate with you

      Andreas.

--
http://fam-tille.de